173 items found

Tags: One Health EJP Glossary Sampling and laboratory testing Animal Health

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  • GlossaryTerm

    Accuracy

    Closeness of estimates to the unknown true values
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  • GlossaryTerm

    Sample Size

    The number of sampling units which are to be included in the sample. In the case of a multi-stage sample this number refers to the number of units at the final stage in the...
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  • GlossaryTerm

    Sequence alignment

    An algorithmic approach to find the best matching of consecutive letters in one sequence (text symbols that represent the polymer subunits of DNA or protein sequences) with...
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  • GlossaryTerm

    Sequence Data

    The raw reads produced from basecalling, usually saved in FASTQ format for NGS data.
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  • GlossaryTerm

    Whole Genome MLST(WGMLST)

    Consist of a fixed set of species specific genes, also including variable and transfeerable loci.
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  • GlossaryTerm

    Subspecies

    In bacterial taxonomy subgroups of a species that differ in their phenotypic or genotypic characteristics.
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  • GlossaryTerm

    In Silico Serotype

    The use of one or several molecular methods to derive the serotype (examples PCR and/or sequencing)
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  • GlossaryTerm

    Population

    a population is a group of people with a common characteristic.
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  • GlossaryTerm

    Antibiotic

    A substance produced by or derived from a microorganism, which destroys or inhibits the growth of other microorganisms.
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  • GlossaryTerm

    Contamination

    The presence or introduction of a hazard
    • Animal Health
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  • GlossaryTerm

    Survey

    ’Survey’: means an investigation in which information is collected systematically usually carried out on a sample of a defined population group, within a defined time period.
    • Animal Health
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  • GlossaryTerm

    Variant detection

    NGS is frequently used to identify mutations in DNA samples from individual patients or experimental organisms. Sequencing can be done at the whole-genome scale; RNA-seq, which...
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  • GlossaryTerm

    Core Genome MLST (CGMLST)

    Strain differentiation by determining the number different alleles in a predefined set of loci that represents core genes.
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  • GlossaryTerm

    Sampling Unit

    Each member of the sampling frame is a sampling unit
    • Animal Health
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  • GlossaryTerm

    Food Handler

    Any person who directly handles packaged or unpackaged food, food equipment and utensils, or food contact surfaces and is therefore expected to comply with food hygiene...
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  • GlossaryTerm

    Identity Check

    Means a check by visual inspection to ensure that the veterinary certificate(s) or veterinary document(s) or other document(s) provided for by veterinary legislation tally with...
    • Animal Health
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  • GlossaryTerm

    Consensus Sequence

    When two or more DNA sequences are aligned, the overlapping portions can be combined to create a single consensus sequence. In positions where all overlapping sequences have the...
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  • GlossaryTerm

    Sample Size

    The number of units randomly chosen from the sampling frame.
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  • GlossaryTerm

    Subtype

    Discrimination of bacteria below the level of species.
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  • GlossaryTerm

    Sampling

    Sampling is the process of selecting a number of cases from all the cases in a particular group or universe.
    • Animal Health
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